values = array(234, 125, 289, 147, 190); echo $graph->create(); Returns HTML code ====================================================================================================== */ class BAR_GRAPH { //---------------------------------------------------------------------------------------------------- // Configuration //---------------------------------------------------------------------------------------------------- var $type = 'hBar'; // graph type: "hBar", "vBar", "pBar", or "fader" var $values; // graph data: array or string with comma-separated values var $graphBGColor = ''; // graph background color: string var $graphBorder = ''; // graph border: string (CSS specification; doesn't work with NN4) var $graphPadding = 0; // graph padding: integer (pixels) var $titles; // titles: array or string with comma-separated values var $titleColor = 'black'; // title font color: string var $titleBGColor = '#C0E0FF'; // title background color: string var $titleBorder = '2px groove white'; // title border: string (CSS specification) var $titleFont = 'Arial, Helvetica'; // title font family: string (CSS specification) var $titleSize = 12; // title font size: integer (pixels) var $titleAlign = 'center'; // title text align: "left", "center", or "right" var $titlePadding = 2; // title padding: integer (pixels) var $labels; // label names: array or string with comma-separated values var $labelColor = 'black'; // label font color: string var $labelBGColor = '#C0E0FF'; // label background color: string var $labelBorder = '2px groove white'; // label border: string (CSS specification; doesn't work with NN4) var $labelFont = 'Arial, Helvetica'; // label font family: string (CSS specification) var $labelSize = 12; // label font size: integer (pixels) var $labelAlign = 'center'; // label text align: "left", "center", or "right" var $labelSpace = 0; // additional space between labels: integer (pixels) var $barWidth = 20; // bar width: integer (pixels) var $barLength = 1.0; // bar length ratio: float (from 0.1 to 2.9) var $barColors; // bar colors OR bar images: array or string with comma-separated values var $barBGColor; // bar background color: string var $barBorder = '2px outset white'; // bar border: string (CSS specification; doesn't work with NN4) var $barLevelColors; // bar level colors: ascending array (bLevel, bColor[,...]); draw bars >= bLevel with bColor var $showValues = 0; // show values: 0 = % only, 1 = abs. and %, 2 = abs. only, 3 = none var $absValuesColor = 'black'; // abs. values font color: string var $absValuesBGColor = '#C0E0FF'; // abs. values background color: string var $absValuesBorder = '2px groove white'; // abs. values border: string (CSS specification; doesn't work with NN4) var $absValuesFont = 'Arial, Helvetica'; // abs. values font family: string (CSS specification) var $absValuesSize = 12; // abs. values font size: integer (pixels) var $absValuesPrefix = ''; // abs. values prefix: string (e.g. "$") var $absValuesSuffix = ''; // abs. values suffix: string (e.g. " kg") var $percValuesColor = 'black'; // perc. values font color: string var $percValuesFont = 'Arial, Helvetica'; // perc. values font family: string (CSS specification) var $percValuesSize = 12; // perc. values font size: integer (pixels) var $percValuesDecimals = 0; // perc. values number of decimals: integer var $charts = 1; // number of charts: integer // hBar/vBar only: var $legend; // legend items: array or string with comma-separated values var $legendColor = 'black'; // legend font color: string var $legendBGColor = '#F0F0F0'; // legend background color: string var $legendBorder = '2px groove white'; // legend border: string (CSS specification; doesn't work with NN4) var $legendFont = 'Arial, Helvetica'; // legend font family: string (CSS specification) var $legendSize = 12; // legend font size: integer (pixels) // debug mode: false = off, true = on; just shows some extra information var $debug = false; // default bar colors; only used if $barColors isn't set var $colors = array('#0000FF', '#FF0000', '#00E000', '#A0A0FF', '#FFA0A0', '#00A000'); // error messages var $err_type = 'ERROR: Type must be "hBar", "vBar", "pBar", or "fader"'; // CSS names (don't change) var $cssGRAPH = ''; var $cssBAR = ''; var $cssBARBG = ''; var $cssTITLE = ''; var $cssLABEL = ''; var $cssLABELBG = ''; var $cssLEGEND = ''; var $cssLEGENDBG = ''; var $cssABSVALUES = ''; var $cssPERCVALUES = ''; //---------------------------------------------------------------------------------------------------- // Class Methods //---------------------------------------------------------------------------------------------------- function BAR_GRAPH($type = '') { if($type) $this->type = $type; } function set_styles() { if($this->graphBGColor) $this->cssGRAPH .= 'background-color:' . $this->graphBGColor . ';'; if($this->graphBorder) $this->cssGRAPH .= 'border:' . $this->graphBorder . ';'; if($this->barBorder) $this->cssBAR .= 'border:' . $this->barBorder . ';'; if($this->barBGColor) $this->cssBARBG .= 'background-color:' . $this->barBGColor . ';'; if($this->titleColor) $this->cssTITLE .= 'color:' . $this->titleColor . ';'; if($this->titleBGColor) $this->cssTITLE .= 'background-color:' . $this->titleBGColor . ';'; if($this->titleBorder) $this->cssTITLE .= 'border:' . $this->titleBorder . ';'; if($this->titleFont) $this->cssTITLE .= 'font-family:' . $this->titleFont . ';'; if($this->titleAlign) $this->cssTITLE .= 'text-align:' . $this->titleAlign . ';'; if($this->titleSize) $this->cssTITLE .= 'font-size:' . $this->titleSize . 'px;'; if($this->titleBGColor) $this->cssTITLE .= 'background-color:' . $this->titleBGColor . ';'; if($this->titlePadding) $this->cssTITLE .= 'padding:' . $this->titlePadding . 'px;'; if($this->labelColor) $this->cssLABEL .= 'color:' . $this->labelColor . ';'; if($this->labelBGColor) $this->cssLABEL .= 'background-color:' . $this->labelBGColor . ';'; if($this->labelBorder) $this->cssLABEL .= 'border:' . $this->labelBorder . ';'; if($this->labelFont) $this->cssLABEL .= 'font-family:' . $this->labelFont . ';'; if($this->labelSize) $this->cssLABEL .= 'font-size:' . $this->labelSize . 'px;'; if($this->labelAlign) $this->cssLABEL .= 'text-align:' . $this->labelAlign . ';'; if($this->labelBGColor) $this->cssLABELBG .= 'background-color:' . $this->labelBGColor . ';'; if($this->legendColor) $this->cssLEGEND .= 'color:' . $this->legendColor . ';'; if($this->legendFont) $this->cssLEGEND .= 'font-family:' . $this->legendFont . ';'; if($this->legendSize) $this->cssLEGEND .= 'font-size:' . $this->legendSize . 'px;'; if($this->legendBGColor) $this->cssLEGENDBG .= 'background-color:' . $this->legendBGColor . ';'; if($this->legendBorder) $this->cssLEGENDBG .= 'border:' . $this->legendBorder . ';'; if($this->absValuesColor) $this->cssABSVALUES .= 'color:' . $this->absValuesColor . ';'; if($this->absValuesBGColor) $this->cssABSVALUES .= 'background-color:' . $this->absValuesBGColor . ';'; if($this->absValuesBorder) $this->cssABSVALUES .= 'border:' . $this->absValuesBorder . ';'; if($this->absValuesFont) $this->cssABSVALUES .= 'font-family:' . $this->absValuesFont . ';'; if($this->absValuesSize) $this->cssABSVALUES .= 'font-size:' . $this->absValuesSize . 'px;'; if($this->percValuesColor) $this->cssPERCVALUES .= 'color:' . $this->percValuesColor . ';'; if($this->percValuesFont) $this->cssPERCVALUES .= 'font-family:' . $this->percValuesFont . ';'; if($this->percValuesSize) $this->cssPERCVALUES .= 'font-size:' . $this->percValuesSize . 'px;'; } function level_color($value, $color) { if($this->barLevelColors) { for($i = 0; $i < count($this->barLevelColors); $i += 2) { if($i+1 < count($this->barLevelColors)) { if(($this->barLevelColors[$i] > 0 && $value >= $this->barLevelColors[$i]) || ($this->barLevelColors[$i] < 0 && $value <= $this->barLevelColors[$i])) { $color = $this->barLevelColors[$i+1]; } } } } return $color; } function build_bar($value, $width, $height, $color) { $title = $this->absValuesPrefix . $value . $this->absValuesSuffix; $bg = eregi('\.(jpg|jpeg|jpe|gif|png)$', $color) ? 'background' : 'bgcolor'; $bar = ''; $bar .= '
' : '>'; $bar .= '
'; $bar .= '
'; return $bar; } function build_fader($value, $width, $height, $x, $color) { $fader = ''; $x -= round($width / 2); if($x > 0) $fader .= ''; $fader .= ''; $fader .= '
' . $this->build_bar($value, $width, $height, $color) . '
'; return $fader; } function build_value($val, $max_dec, $sum = 0, $align = '') { $val = number_format($val, $max_dec); if($sum) $sum = number_format($sum, $max_dec); $value = 'absValuesPrefix . $val . $this->absValuesSuffix; if($sum) $value .= ' / ' . $this->absValuesPrefix . $sum . $this->absValuesSuffix; $value .= ' '; return $value; } function build_legend($barColors) { $legend = ''; $legend .= '
'; $legend .= ''; $l = (is_array($this->legend)) ? $this->legend : explode(',', $this->legend); for($i = 0; $i < count($barColors); $i++) { $legend .= ''; $legend .= ''; $legend .= ''; $legend .= ''; } $legend .= '
' . $this->build_bar('', $this->barWidth, $this->barWidth, $barColors[$i]) . '' . trim($l[$i]) . '
'; return $legend; } function build_hTitle($titleLabel, $titleValue, $titleBar) { $title = ''; $title .= '' . $titleLabel . ''; if($titleValue != '') $title .= '' . $titleValue . ''; $title .= '' . $titleBar . ''; $title .= ''; return $title; } function create_hBar($value, $percent, $mPerc, $mPerc_neg, $max_neg, $mul, $valSpace, $bColor, $border, $spacer, $spacer_neg) { $bar = ''; if($percent < 0) { $percent *= -1; $bar .= ''; } else { if($max_neg) { $bar .= ''; } if($percent) { $bar .= ''; } else $bar .= ''; $bar .= ''; } $bar .= '
'; if($this->showValues < 2) $bar .= '' . number_format($percent, $this->percValuesDecimals) . '%'; $bar .= ' '; $bar .= $this->build_bar($value, round($percent * $mul), $this->barWidth, $bColor); $bar .= ''; $bar .= '
'; $bar .= $this->build_bar($value, round($percent * $mul), $this->barWidth, $bColor); $bar .= ''; if($this->showValues < 2) $bar .= ' ' . number_format($percent, $this->percValuesDecimals) . '%'; $bar .= ' 
'; return $bar; } function create_vBar($value, $percent, $mPerc, $mPerc_neg, $max_neg, $mul, $valSpace, $bColor, $border, $spacer, $spacer_neg) { $bar = ''; if($percent < 0) { $percent *= -1; $bar .= ''; $bar .= ''; } else { $bar .= ''; if($percent) { $bar .= ''; } else $bar .= ''; if($max_neg) { $bar .= ''; } } $bar .= '
'; $bar .= $this->build_bar($value, $this->barWidth, round($percent * $mul), $bColor); $bar .= '
'; $bar .= ($this->showValues < 2) ? '' . number_format($percent, $this->percValuesDecimals) . '%' : ' '; $bar .= ''; if($this->showValues < 2) $bar .= number_format($percent, $this->percValuesDecimals) . '%'; $bar .= '
'; $bar .= $this->build_bar($value, $this->barWidth, round($percent * $mul), $bColor); $bar .= '
'; $bar .= '
'; return $bar; } function create() { error_reporting(E_WARNING); $this->type = strtolower($this->type); $d = (is_array($this->values)) ? $this->values : explode(',', $this->values); if(is_array($this->titles)) $t = $this->titles; else $t = (strlen($this->titles) > 1) ? explode(',', $this->titles) : array(); if(is_array($this->labels)) $r = $this->labels; else $r = (strlen($this->labels) > 1) ? explode(',', $this->labels) : array(); if($this->barColors) $drc = (is_array($this->barColors)) ? $this->barColors : explode(',', $this->barColors); else $drc = array(); $val = $bc = array(); if($this->barLength < 0.1) $this->barLength = 0.1; else if($this->barLength > 2.9) $this->barLength = 2.9; $bars = (count($d) > count($r)) ? count($d) : count($r); if($this->type == 'pbar' || $this->type == 'fader') { if(!$this->barBGColor) $this->barBGColor = $this->labelBGColor; if($this->labelBGColor == $this->barBGColor && count($t) == 0) { $this->labelBGColor = ''; $this->labelBorder = ''; } } $this->set_styles(); $graph = ''; $graph .= 'cssGRAPH ? ' style="' . $this->cssGRAPH . '"' : '') . '>'; if($this->legend && $this->type != 'pbar' && $this->type != 'fader') $graph .= '
'; if($this->type == 'vbar') $graph .= ''; $graph .= '
'; if($this->charts > 1) { $divide = ceil($bars / $this->charts); $graph .= ''; if($this->showValues < 2) $graph .= ''; $graph .= ''; if($this->labelSpace && $i < count($val[$chart])-1) $graph .= ''; } } else $graph .= ''; $graph .= '
'; } else $divide = 0; for($i = $sum = $max = $max_neg = $max_dec = $ccnt = $lcnt = $chart = 0; $i < $bars; $i++) { if($divide && $i && !($i % $divide)) { $lcnt = 0; $chart++; } $drv = explode(';', $d[$i]); for($j = $dec = 0; $j < count($drv); $j++) { $val[$chart][$lcnt][$j] = $v = trim(str_replace(',', '.', $drv[$j])); if($v > $max) $max = $v; else if($v < $max_neg) $max_neg = $v; if($v < 0) $v *= -1; $sum += $v; if(strstr($v, '.')) { $dec = strlen(substr($v, strrpos($v, '.') + 1)); if($dec > $max_dec) $max_dec = $dec; } if(!$bc[$j]) { if($ccnt >= count($this->colors)) $ccnt = 0; $bc[$j] = (!$drc[$j] || strlen($drc[$j]) < 3) ? $this->colors[$ccnt++] : trim($drc[$j]); } } $lcnt++; } $border = (int) $this->barBorder; $mPerc = $sum ? round($max * 100 / $sum) : 0; if($this->type == 'pbar' || $this->type == 'fader') $mul = 2; else $mul = $mPerc ? 100 / $mPerc : 1; $mul *= $this->barLength; if($this->showValues < 2) { if($this->type == 'hbar') $valSpace = ($this->percValuesDecimals * ($this->percValuesSize / 1.6)) + ($this->percValuesSize * 3.2); else $valSpace = $this->percValuesSize * 1.2; } else $valSpace = $this->percValuesSize; $spacer = $maxSize = round($mPerc * $mul + $valSpace + $border * 2); if($max_neg) { $mPerc_neg = $sum ? round(-$max_neg * 100 / $sum) : 0; $spacer_neg = round($mPerc_neg * $mul + $valSpace + $border * 2); $maxSize += $spacer_neg; } $titleLabel = $titleValue = $titleBar = ''; if(count($t) > 0) { $titleLabel = ($t[0] == '') ? ' ' : $t[0]; if($this->showValues == 1 || $this->showValues == 2) { $titleValue = ($t[1] == '') ? ' ' : $t[1]; $titleBar = ($t[2] == '') ? ' ' : $t[2]; } else $titleBar = ($t[1] == '') ? ' ' : $t[1]; } for($chart = $lcnt = 0; $chart < count($val); $chart++) { $graph .= ''; if($this->type == 'hbar') { if(count($t) > 0) $graph .= $this->build_hTitle($titleLabel, $titleValue, $titleBar); for($i = 0; $i < count($val[$chart]); $i++, $lcnt++) { $label = ($lcnt < count($r)) ? trim($r[$lcnt]) : $lcnt+1; $rowspan = count($val[$chart][$i]); $graph .= ''; for($j = 0; $j < count($val[$chart][$i]); $j++) { $percent = $sum ? $val[$chart][$i][$j] * 100 / $sum : 0; $value = number_format($val[$chart][$i][$j], $max_dec); $bColor = $this->level_color($val[$chart][$i][$j], $bc[$j]); if($this->showValues == 1 || $this->showValues == 2) $graph .= $this->build_value($val[$chart][$i][$j], $max_dec, 0, 'right'); $graph .= 'cssBARBG ? ' style="' . $this->cssBARBG . '"' : '') . ' height=100% width=' . $maxSize . '>'; $graph .= $this->create_hBar($value, $percent, $mPerc, $mPerc_neg, $max_neg, $mul, $valSpace, $bColor, $border, $spacer, $spacer_neg); $graph .= ''; if($j < count($val[$chart][$i]) - 1) $graph .= ''; } if($this->labelSpace && $i < count($val[$chart])-1) $graph .= ''; } } else if($this->type == 'vbar') { $graph .= ''; if($titleBar != '') { $titleBar = str_replace('-', '-
', $titleBar); $graph .= ''; } for($i = 0; $i < count($val[$chart]); $i++) { for($j = 0; $j < count($val[$chart][$i]); $j++) { $percent = $sum ? $val[$chart][$i][$j] * 100 / $sum : 0; $value = number_format($val[$chart][$i][$j], $max_dec); $bColor = $this->level_color($val[$chart][$i][$j], $bc[$j]); $graph .= 'cssBARBG ? ' style="' . $this->cssBARBG . '"' : '') . '>'; $graph .= $this->create_vBar($value, $percent, $mPerc, $mPerc_neg, $max_neg, $mul, $valSpace, $bColor, $border, $spacer, $spacer_neg); $graph .= ''; } if($this->labelSpace) $graph .= ''; } if($this->showValues == 1 || $this->showValues == 2) { $graph .= ''; if($titleValue != '') $graph .= ''; for($i = 0; $i < count($val[$chart]); $i++) { for($j = 0; $j < count($val[$chart][$i]); $j++) { $graph .= $this->build_value($val[$chart][$i][$j], $max_dec); } if($this->labelSpace) $graph .= ''; } } $graph .= ''; if($titleLabel != '') $graph .= ''; for($i = 0; $i < count($val[$chart]); $i++, $lcnt++) { $label = ($lcnt < count($r)) ? trim($r[$lcnt]) : $lcnt+1; $colspan = count($val[$chart][$i]); $graph .= ''; if($this->labelSpace) $graph .= ''; } $graph .= ''; } else if($this->type == 'pbar' || $this->type == 'fader') { if(count($t) > 0) $graph .= $this->build_hTitle($titleLabel, $titleValue, $titleBar); for($i = 0; $i < count($val[$chart]); $i++, $lcnt++) { $label = ($lcnt < count($r)) ? trim($r[$lcnt]) : ''; $graph .= ''; if($label) { $graph .= ''; } $sum = (float) $val[$chart][$i][1]; $percent = $sum ? $val[$chart][$i][0] * 100 / $sum : 0; $value = number_format($val[$chart][$i][0], $max_dec); if($this->showValues == 1 || $this->showValues == 2) $graph .= $this->build_value($val[$chart][$i][0], $max_dec, $sum, 'right'); $graph .= 'cssBARBG ? ' style="' . $this->cssBARBG . '"' : '') . '>'; $this->barColors = $drc[$i] ? trim($drc[$i]) : $this->colors[0]; $bColor = $this->level_color($val[$chart][$i][0], $this->barColors); $graph .= '
1) ? ' rowspan=' . $rowspan : '') . '>'; $graph .= ' ' . $label . ' 
' . $titleBar . '
' . $titleValue . '
' . $titleLabel . ' 1) ? ' colspan=' . $colspan : '') . '>'; $graph .= ' ' . $label . ' 
'; $graph .= ' ' . $label . ' 
'; $graph .= '
'; if($this->type == 'fader') $graph .= $this->build_fader($value, round($this->barWidth / 2), $this->barWidth, round($percent * $mul), $bColor); else $graph .= $this->build_bar($value, round($percent * $mul), $this->barWidth, $bColor); $graph .= '
 ' . number_format($percent, $this->percValuesDecimals) . '%
' . $this->err_type . '
'; if($chart < $this->charts - 1 && count($val[$chart+1])) { $graph .= '
'; } } if($this->charts > 1) $graph .= '
'; if($this->legend && $this->type != 'pbar' && $this->type != 'fader') { $graph .= ' '; $graph .= $this->build_legend($bc); $graph .= ''; } if($this->debug) { $graph .= "
sum=$sum max=$max max_neg=$max_neg max_dec=$max_dec "; $graph .= "mPerc=$mPerc mPerc_neg=$mPerc_neg mul=$mul valSpace=$valSpace"; } $graph .= ''; return $graph; } } ?> Dragon Exploratory System on Hepatitis C Virus (DESHCV)  
Help | Contact |
Dragon Exploratory System on Hepatitis C Virus (DESHCV)  
  Sentences Summary HepatitisC   

Page: 1 2 3 4 5 6 ... 41178
SentenceDisplay Terms 




However, they also suggest that some cellular factors might be required for the proper in vitro assembly of capsids.

However, they are important for efficient accessibility of the NS4A/B site but not the other trans-cleavage sites.

However, they indicate that, should such effects exist, they would be independent on load and genetic features of the infecting TTV.

However, this approach was highly dependent on the particular lipidated HTL/CTL combination utilized, and was marginally effective for simultaneous priming of multiple CTL responses.

However, this effect was not absolutely required for the activation of p21 by Core, as demonstrated in Hep3B cells.

However, three of these epitopes induced IL-10 production (down-regulatory) raising the question as to whether these cells play a role in viral persistence.

However, using membrane floatation assays and immunofluorescence, we now show targeting of the NS4B-CTD to membranes.

However, viral fusion is a very complex process involving fusion glycoproteins present on the viral envelope.

Page: 1 2 3 4 5 6 ... 41178

South African National Bioinformatics Institute - King Abdullah University of Science and Technology - OrionCell
© 2010